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Apps

The steinbock Docker container exposes various third-party apps via the apps command.

Graphical user interfaces

Graphical user interfaces are not supported on Windows hosts, see Docker configuration.

Ilastik

To run Ilastik:

steinbock apps ilastik

Without additional arguments, this will start the graphical user interface of Ilastik.

CellProfiler

To run CellProfiler:

steinbock apps cellprofiler

Without additional arguments, this will start the graphical user interface of CellProfiler.