Welcome

Overview

Histology Topography Cytometry Analysis Toolbox (histoCAT) is a web platform to visualize and analyse multiplexed image cytometry data interactively.

If you want to use desktop applications with similar functionality, there are two versions available:

MATLAB edition: https://github.com/BodenmillerGroup/histoCAT
histoCAT++ for Mac: https://github.com/BodenmillerGroup/histoCAT3D

histoCAT

Resources

Code: https://github.com/BodenmillerGroup/histocat-web

Documentation: https://bodenmillergroup.github.io/histocat-web

Issue tracker: https://github.com/BodenmillerGroup/histocat-web/issues

Authors

Anton Rau (main author)

Contributing

Pull requests are welcome. Please make sure to update documentation as appropriate.

For major changes, please open an issue first to discuss what you would like to change.