Models

Warning

This section is relevant to super-admin users only!

Before running DeepCell automatic cell segmentation, compatible models should be uploaded to histoCAT. Because these models are available to all user groups, only super-admins can manage them.

Important

Please make sure that uploaded models are compatible with a standard TensorFlow model storage format!

In order to upload the model, please create a .zip archive that has its content looking similar to the following file structure:

Info

At the time of the writing, the latest DeepCell Mesmer model can be downloaded here: https://deepcell-data.s3-us-west-1.amazonaws.com/saved-models/MultiplexSegmentation-7.tar.gz

Super-admin user can manage existing models or upload a new one by clicking Models button: