Visualization

Images

In this step, images and masks are visualized using the napari image viewer.

Experimental feature

This is a highly experimental feature. It requires OpenGL-enabled X forwarding and will not work on most systems. Alternatively, one can resort to Xpra-enabled Docker containers to run a steinbock-enabled desktop environment within a web browser (undocumented).

Docker and graphical user interfaces

Running napari using steinbock Docker containers requires support for graphical user interfaces (e.g. X forwarding).

To open the image myimage.tiff (and, optionally, the corresponding mask) in napari:

steinbock view myimage.tiff